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Molecular genetic analysis of the PLP1 gene in 38 families with PLP1-related disorders: identification and functional characterization of 11 novel PLP1 mutations.

机译:38个与PLP1相关疾病的家庭中PLP1基因的分子遗传分析:11个新PLP1突变的鉴定和功能表征。

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摘要

BACKGROUND: The breadth of the clinical spectrum underlying Pelizaeus-Merzbacher disease and spastic paraplegia type 2 is due to the extensive allelic heterogeneity in the X-linked PLP1 gene encoding myelin proteolipid protein (PLP). PLP1 mutations range from gene duplications of variable size found in 60-70% of patients to intragenic lesions present in 15-20% of patients.METHODS: Forty-eight male patients from 38 unrelated families with a PLP1-related disorder were studied. All DNA samples were screened for PLP1 gene duplications using real-time PCR. PLP1 gene sequencing analysis was performed on patients negative for the duplication. The mutational status of all 14 potential carrier mothers of the familial PLP1 gene mutation was determined as well as 15/24 potential carrier mothers of the PLP1 duplication.RESULTS AND CONCLUSIONS: PLP1 gene duplications were identified in 24 of the unrelated patients whereas a variety of intragenic PLP1 mutations were found in the remaining 14 patients. Of the 14 different intragenic lesions, 11 were novel; these included one nonsense and 7 missense mutations, a 657-bp deletion, a microdeletion and a microduplication. The functional significance of the novel PLP1 missense mutations, all occurring at evolutionarily conserved residues, was analysed by the MutPred tool whereas their potential effect on splicing was ascertained using the Skippy algorithm and a neural network. Although MutPred predicted that all 7 novel missense mutations would be likely to be deleterious, in silico analysis indicated that four of them (p.Leu146Val, p.Leu159Pro, p.Thr230Ile, p.Ala247Asp) might cause exon skipping by altering exonic splicing elements. These predictions were then investigated in vitro for both p.Leu146Val and p.Thr230Ile by means of RNA or minigene studies and were subsequently confirmed in the case of p.Leu146Val. Peripheral neuropathy was noted in four patients harbouring intragenic mutations that altered RNA processing, but was absent from all PLP1-duplication patients. Unprecedentedly, family studies revealed the de novo occurrence of the PLP1 duplication at a frequency of 20%.
机译:背景:Pelizaeus-Merzbacher病和2型痉挛性截瘫的临床表现谱的广度是由于编码髓磷脂蛋白脂蛋白(PLP)的X连锁PLP1基因具有广泛的等位基因异质性。 PLP1突变的范围从在60-70%的患者中发现的可变大小基因重复到在15-20%的患者中存在的基因内病变。方法:研究了来自38个与PLP1相关的无关家族的男性患者。使用实时PCR筛选所有DNA样品的PLP1基因重复。对重复阴性的患者进行PLP1基因测序分析。确定了家族性PLP1基因突变的所有14个潜在携带者母亲以及PLP1复制的15/24个潜在携带者母亲的突变状态。结果与结论:在24例无关患者中发现了PLP1基因重复。在其余14例患者中发现了基因内PLP1突变。在14种不同的基因内病变中,有11种是新发的;这些包括一个无意义的突变和7个错义的突变,657bp的缺失,微缺失和微复制。新的PLP1错义突变的功能意义均发生在进化保守的残基上,通过MutPred工具进行了分析,而使用Skippy算法和神经网络确定了它们对剪接的潜在影响。尽管MutPred预测所有7个新的错义突变都可能有害,但计算机分析表明其中的四个(p.Leu146Val,p.Leu159Pro,p.Thr230Ile,p.Ala247Asp)可能会通过改变外显子剪接元件而导致外显子跳跃。 。然后通过RNA或小基因研究对p.Leu146Val和p.Thr230Ile的体外这些预言进行了研究,随后在p.Leu146Val的情况下得到了证实。在四名患者中发现周围神经病变,这些患者具有改变RNA加工的基因内突变,但所有PLP1复制患者均不存在。前所未有的家庭研究表明,从头发生PLP1重复的频率为20%。

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